SampleNames: SOD_Neg1 SOD_Neg2 SOD_CO2-1 SOD_CO2-2 SOD_CO2-3 SOD_CO2-4 SOD_CO2-5 SOD_CO2-6 SOD_CO2-7 SOD_CO2-8 SOD_cont-1 SOD_cont-2 SOD_cont-3 SOD_cont-4 SOD_cont-5 SOD_cont-6 SOD_cont-7 SOD_cont-8 SOD_Neg3 SOD_Neg4 SOD_mm SOD_blank SOD_blank1 SOD_blank2 MDR_Neg1 MDR_Neg2 MDR_CO2-1 MDR_CO2-2 MDR_CO2-3 MDR_CO2-4 MDR_CO2-5 MDR_CO2-6 MDR_CO2-7 MDR_CO2-8 MDR_cont-1 MDR_cont-2 MDR_cont-3 MDR_cont-4 MDR_cont-5 MDR_cont-6 MDR_cont-7 MDR_cont-8 MDR_Neg3 MDR_Neg4 MDR_mm MDR_blank MDR_blank1 MDR_blank2 AURKA_Neg1 AURKA_Neg2 AURKA_CO2-1 AURKA_CO2-2 AURKA_CO2-3 AURKA_CO2-4 AURKA_CO2-5 AURKA_CO2-6 AURKA_CO2-7 AURKA_CO2-8 AURKA_cont-1 AURKA_cont-2 AURKA_cont-3 AURKA_cont-4 AURKA_cont-5 AURKA_cont-6 AURKA_cont-7 AURKA_cont-8 AURKA_Neg3 AURKA_Neg4 AURKA_mm AURKA_blank AURKA_blank1 AURKA_blank2 Logistic_a: 0.00194014 0.0077632 0.727471 0.755936 0.622307 0.541858 0.636445 0.44234 0.446733 0.835014 0.915795 0.615583 0.941991 0.779586 0.673352 0.463739 0.485504 0.659221 0.00604127 0.589773 0.00704682 0.14392 0.068368 0.00242879 0.00620658 0.00260824 0.293735 0.301522 0.197497 0.364881 0.255677 0.242067 0.189409 0.190045 0.145101 0.193794 0.286108 0.259272 0.249299 0.21301 0.0562744 0.189408 0.00751316 0.003823 0.00445264 0.00338001 0.00258009 0.00323807 0.00236482 0.0037567 0.599544 0.567583 0.548627 0.37819 0.398349 0.299128 0.624024 0.570055 0.268781 0.577837 0.588988 0.450888 0.429097 0.305888 0.363348 0.741583 0.00277814 0.00778358 0.00851867 0.00705689 0.00863362 0.00774722 Logistic_b: -47.64 -8.20763 -12.9902 -12.6559 -14.1825 -14.0129 -13.2431 -13.158 -12.8623 -14.7618 -13.087 -13.7086 -12.5876 -12.4462 -12.49 -12.0443 -13.0928 -11.5466 -15.0207 -12.1879 -9.96551 -4.86689 -2.45419 8.34722 -11.0187 -49.0341 -18.4701 -20.2169 -25.0189 -20.2823 -23.2022 -19.6908 -20.5753 -23.3881 -25.796 -24.4288 -21.8293 -23.0699 -21.8851 -24.2581 -31.0972 -25.6682 -12.8178 4.25894 -0.0803229 -0.460783 14.759 7.10185 7.92838 0.076416 -18.6886 -19.6029 -22.6408 -20.2968 -24.9489 -20.3944 -20.2107 -20.0889 -26.2052 -23.0714 -22.8705 -20.4438 -23.3278 -24.2428 -24.1068 -19.7805 9.03417 2.86151 3.50805 3.37216 3.7337 2.11268 Logistic_X0: 29.3017 35.3099 25.3253 24.8903 27.9885 27.7079 23.7402 25.6042 24.5521 29.4357 25.8868 26.9059 24.9337 24.6474 24.7375 23.5746 26.2145 23.1895 28.1038 50.411 31.2597 75.9447 151.067 9.01648 37.7359 36.0901 34.845 37.0358 38.0194 37.1538 37.7214 36.2961 37.0996 37.7338 38.1042 38.2189 37.5895 37.6791 37.2729 37.8603 38.2891 38.2135 37.3289 5.35427 5.14252e+006 1.62837e-009 12.095 12.0845 7.31482 2.54372 36.1293 36.7339 37.7381 37.0179 37.8882 37.2714 37.0362 37.095 38.1687 37.7867 37.4603 37.0499 37.6143 37.8896 37.9633 36.8449 12.7004 8.00685 9.85997 10.307 8.99419 8.0621 Logistic_Y0: 0.000990376 0.0014415 0.00118642 0.00273511 0.00122277 0.00218991 0.00148937 0.0012126 0.00134556 0.00359345 0.00233752 0.00166225 0.00248537 0.00255217 0.00119316 0.00225902 0.0011488 0.00104738 0.00277459 0.00184246 0.00200134 0.00234925 0.00140053 0.00167487 0.00162998 0.00117638 0.00214106 0.00207991 0.00313913 0.00196269 0.00141414 0.00121445 0.00175924 0.00182921 0.00144363 0.00277031 0.00187852 0.00176349 0.00234095 0.0024736 0.00200208 0.00193827 0.00166536 0.00128424 0.000688886 -0.000945341 0.00135117 0.001547 0.00141808 -0.000390647 0.00198336 0.00301286 0.00251681 0.00132515 0.0037349 0.00236221 0.000836765 0.00119047 0.0011233 0.00320722 0.00496003 0.00152201 0.00235584 0.00323539 0.00196244 0.00244139 0.00105464 0.00215915 0.00287589 0.00270716 0.00427368 0.00166453 Logistic_Pvalue: 1.26416e-007 6.00631e-014 0 0 0 0 0 0 0 0 0 0 0 1.11022e-016 0 0 0 0 1.05652e-011 0 4.44089e-016 1.65023e-006 0.00977367 1.53668e-006 3.71097e-008 9.52581e-006 0 1.11022e-016 0 0 1.11022e-016 1.11022e-016 0 0 1.11022e-016 0 0 2.22045e-016 0 0 0 0 5.14131e-009 1.39906e-005 0.985967 0.980007 1.07764e-006 7.52572e-009 2.72508e-007 0.981147 0 1.11022e-016 1.11022e-016 0 1.11022e-016 0 2.22045e-016 0 0 1.11022e-016 1.11022e-016 0 0 1.11022e-016 1.11022e-016 0 6.41767e-007 1.43219e-014 7.87654e-011 1.59083e-009 6.72627e-008 3.20854e-014 Noise(SPE): 0.000134765 0.000186295 0.000829917 0.00111975 0.00058645 0.000717931 0.000987986 0.000589929 0.000666523 0.000809961 0.000876202 0.000679287 0.00118892 0.0011206 0.000864829 0.000869188 0.000417035 0.000735359 0.000301973 0.00780405 0.000177289 0.0098465 0.00841831 0.000169431 0.000176175 0.000132351 0.000263269 0.000276699 0.000365289 0.000262163 0.000189155 0.000192558 0.000166604 0.000199587 0.000138178 0.000236027 0.000289293 0.000193191 0.000318226 0.000309301 0.000209527 0.000242973 0.000203058 0.000229409 0.00622199 0.00931725 0.000206068 0.000222527 0.000133262 3.93476 0.000298225 0.000259883 0.000271784 0.000195226 0.000486587 0.000294339 0.000197832 0.000199431 0.000190209 0.000339648 0.000756834 0.000290843 0.00039962 0.000373944 0.000178866 0.000364912 0.000231773 0.000363558 0.000567714 0.000577 0.000652997 0.000541402 EndofExpPhase(SDM): 0.00138014 0.00262582 0.127541 0.133301 0.11124 0.0977626 0.112481 0.0782504 0.0787758 0.152323 0.161652 0.109771 0.164993 0.136707 0.117158 0.0814694 0.0856164 0.112526 0.00385403 0.102855 0.00314721 0.018864 0.00363226 0.00233867 0.00266734 0.00170112 0.0563874 0.0584484 0.0409738 0.0702043 0.0500039 0.0463127 0.0372478 0.0379778 0.0293261 0.0398042 0.0558737 0.0510053 0.0494036 0.0431496 0.0129978 0.0383169 0.00296661 0.0025718 0.0025718 0.0025718 0.00198553 0.00246857 0.00207241 0.00207241 0.11289 0.108694 0.106494 0.0720622 0.080025 0.0583457 0.117491 0.107673 0.0528515 0.112953 0.116714 0.0859343 0.0839515 0.0616435 0.0713009 0.140685 0.00180041 0.00530573 0.00599228 0.00533643 0.00734541 0.0054016 CP(SPE): 27.7483 22.4814 15.0333 14.8772 17.1263 17.2694 14.5688 15.4831 14.805 18.3983 15.2198 16.3743 14.6734 14.5695 14.5181 13.9985 15.2895 12.8715 23.1006 35.3903 21.6576 44.4101 67.8858 12.2974 27.3842 33.9975 23.8321 26.2063 29.5667 26.0033 27.6479 25.2625 26.3556 28.1442 29.0984 29.0402 27.408 27.5763 27.4905 28.9213 31.9901 29.4833 28.2246 10.2157 -42 -42 14.2734 17.443 10.437 -42 24.0501 24.8161 26.9658 25.4957 28.9576 26.5432 24.8606 24.9621 28.9406 27.3726 28.0016 25.8668 27.8897 28.7338 27.6795 25.07 16.5589 22.9722 20.9235 21.1164 17.5844 27.4505 CP(SDM): 28.4647 28.6527 22.46 21.9926 25.1117 24.8223 21.1104 22.7478 21.744 26.5391 22.9817 24.0359 22.0136 21.7248 21.8155 20.6764 23.2741 20.2029 25.39 44.2941 26.5192 49.9092 37.9718 10.1372 32.6177 35.0893 32.1532 34.4385 35.8932 34.5572 35.4366 33.678 34.5461 35.4675 36.0409 36.0269 35.1603 35.383 34.8707 35.6727 36.5856 36.1334 33.0432 6.27765 -42 -42 13.0492 13.7593 8.25734 -42 33.3732 34.0715 35.3921 34.4328 35.7631 34.6819 34.438 34.4758 36.136 35.4842 35.1564 34.4824 35.349 35.6989 35.7551 34.2001 14.191 9.16877 11.5341 12.0296 10.5443 8.33576 DynamicThreshold: 0.00125264 0.00212681 0.0647789 0.0685778 0.0565244 0.0503352 0.0574793 0.0400265 0.040394 0.0783634 0.0824329 0.0560564 0.0843339 0.0701901 0.0596078 0.0422988 0.0435911 0.0571544 0.0034653 0.0562509 0.00266292 0.0155299 0.00672555 0.00209149 0.00223675 0.00150492 0.0293959 0.0304025 0.0222391 0.0362146 0.0258036 0.0238599 0.0195868 0.0200033 0.015454 0.0214053 0.0290208 0.026481 0.0260314 0.0229663 0.00760473 0.0202491 0.00241751 0.00204272 0.00474134 0.00547186 0.00177139 0.00211905 0.00181187 1.96822 0.0575856 0.0559832 0.0546413 0.0367913 0.0421233 0.0305011 0.0592629 0.0545314 0.0270825 0.0582497 0.0612153 0.0438736 0.0433535 0.0326264 0.0367211 0.0717455 0.00154341 0.00391422 0.00471794 0.0043103 0.00613605 0.00380376 LowerCycleNumber: Error! Error! 15 15 17 17 15 15 15 18 15 16 15 15 15 14 15 13 Error! 35 22 Error! Error! Error! Error! Error! 24 26 30 26 28 25 26 28 29 29 27 28 27 29 32 29 Error! Error! Error! Error! Error! Error! Error! Error! 24 25 27 25 29 27 25 25 29 27 28 26 28 29 28 25 Error! Error! Error! Error! Error! Error! UpperCycleNumber: Error! Error! 22 22 25 25 21 23 22 27 23 24 22 22 22 21 23 20 Error! 40 27 Error! Error! Error! Error! Error! 32 34 36 35 35 34 35 35 36 36 35 35 35 36 37 36 Error! Error! Error! Error! Error! Error! Error! Error! 33 34 35 34 36 35 34 34 36 35 35 34 35 36 36 34 Error! Error! Error! Error! Error! Error! PointsForRegression: Error! Error! 8 8 9 9 7 9 8 10 9 9 8 8 8 8 9 8 Error! 6 6 Error! Error! Error! Error! Error! 9 9 7 10 8 10 10 8 8 8 9 8 9 8 6 8 Error! Error! Error! Error! Error! Error! Error! Error! 10 10 9 10 8 9 10 10 8 9 8 9 8 8 9 10 Error! Error! Error! Error! Error! Error! Number_OfRegressionWindows: Error! Error! 121 136 340 340 49 334 132 782 302 329 130 131 134 136 332 144 Error! 2 3 Error! Error! Error! Error! Error! 337 349 40 787 113 758 788 88 115 134 341 141 305 120 12 131 Error! Error! Error! Error! Error! Error! Error! Error! 750 796 320 784 121 328 775 778 111 343 99 325 33 121 301 738 Error! Error! Error! Error! Error! Error! WeightedAverage_OfPvalue: Error! Error! 0.00468656 0.00429631 0.00315506 0.00320557 0.00586855 0.00341458 0.00437223 0.00241242 0.00375047 0.00328767 0.00463382 0.00418616 0.00433339 0.00394266 0.00296591 0.00429283 Error! 0.0303845 0.024937 Error! Error! Error! Error! Error! 0.00358741 0.0030215 0.00736653 0.0021909 0.00566166 0.00277256 0.00232872 0.00529305 0.00461648 0.00485882 0.00318667 0.00404726 0.00393926 0.00589417 0.00804382 0.0048655 Error! Error! Error! Error! Error! Error! Error! Error! 0.00269353 0.00218937 0.0034142 0.00229561 0.00587891 0.00330439 0.00247176 0.00230062 0.00567551 0.00290817 0.00699708 0.00341751 0.00833548 0.00569465 0.00443592 0.00284149 Error! Error! Error! Error! Error! Error! Stderr_OfWeightedPvalue: Error! Error! 0.00128277 0.00133941 0.000678623 0.000722603 0.00249342 0.000716452 0.00127294 0.000364136 0.000737947 0.000678488 0.00121616 0.00130791 0.00137789 0.00139716 0.000646908 0.00126515 Error! 0.00855743 0.00984919 Error! Error! Error! Error! Error! 0.000674053 0.000489451 0.00162769 0.000328926 0.0008427 0.000361584 0.000353727 0.000901607 0.00107919 0.00114201 0.000621134 0.000991088 0.000557527 0.000967713 0.00547057 0.000997463 Error! Error! Error! Error! Error! Error! Error! Error! 0.000296158 0.000302377 0.000554704 0.000318994 0.000874015 0.000647085 0.000335031 0.000300077 0.0011133 0.000452001 0.00121988 0.000603882 0.00153721 0.000993515 0.00055542 0.000322985 Error! Error! Error! Error! Error! Error! WeightedAverage_OfEfficiency: Error! Error! 0.88189 0.768745 0.780819 0.760161 0.869277 0.787696 0.789327 0.735226 0.86715 0.839608 0.830036 0.744124 0.81771 0.737374 0.821645 0.812143 Error! 0.829438 1.10277 Error! Error! Error! Error! Error! 0.870187 0.759882 1.13753 0.687355 1.09299 0.828085 0.805254 1.09017 1.02442 0.903405 0.769091 0.856002 0.879055 0.995732 0.991301 0.897896 Error! Error! Error! Error! Error! Error! Error! Error! 1.00532 0.750214 0.978528 0.876726 1.00105 0.741823 0.965032 0.914936 1.10555 0.927624 1.09559 0.947138 1.01057 0.892875 1.07607 0.930661 Error! Error! Error! Error! Error! Error! Stderr_OfWeightedEfficiency: Error! Error! 0.0120172 0.00884692 0.00509731 0.0052597 0.0151425 0.00668914 0.00944983 0.00334833 0.00745375 0.00672658 0.0103044 0.00951138 0.0109512 0.00924818 0.00561172 0.00884897 Error! 0.180768 0.162743 Error! Error! Error! Error! Error! 0.00528145 0.00469173 0.0212311 0.00292342 0.0136267 0.00380679 0.00307967 0.0186485 0.0130667 0.0132553 0.00665262 0.00982565 0.00852431 0.0145385 0.0347172 0.00913463 Error! Error! Error! Error! Error! Error! Error! Error! 0.00463965 0.00324641 0.00643776 0.00360355 0.0131456 0.00501152 0.00362545 0.00393243 0.014725 0.00544475 0.0162793 0.00612669 0.021578 0.0115794 0.00823301 0.00467803 Error! Error! Error! Error! Error! Error! CT: 28.1822 26.5675 21.1414 20.6731 23.7523 23.4672 19.8971 21.4303 20.4591 25.156 21.64 22.694 20.6838 20.4003 20.4883 19.381 21.9148 18.8785 24.5229 41.7881 24.8992 47.3972 55.186 10.8886 30.8434 34.6921 30.7984 33.108 34.7713 33.2243 34.2359 32.3423 33.2334 34.2776 34.9403 34.8694 33.8993 34.1775 33.6256 34.5207 35.6715 35.0272 31.4514 7.43166 -42 -42 13.5138 15.0089 8.96233 -42 31.9787 32.7111 34.1622 33.1036 34.6372 33.3538 33.1013 33.1302 35.0472 34.274 33.9532 33.1617 34.1591 34.5434 34.5855 32.8466 15.0677 12.3238 14.233 14.8188 12.7089 12.7221 TotalSampleNumber: 72 ReplicateSampleNames: SOD_Neg1 SOD_Neg2 SOD_CO2-1 SOD_CO2-2 SOD_CO2-3 SOD_CO2-4 SOD_CO2-5 SOD_CO2-6 SOD_CO2-7 SOD_CO2-8 SOD_cont-1 SOD_cont-2 SOD_cont-3 SOD_cont-4 SOD_cont-5 SOD_cont-6 SOD_cont-7 SOD_cont-8 SOD_Neg3 SOD_Neg4 SOD_mm SOD_blank SOD_blank1 SOD_blank2 MDR_Neg1 MDR_Neg2 MDR_CO2-1 MDR_CO2-2 MDR_CO2-3 MDR_CO2-4 MDR_CO2-5 MDR_CO2-6 MDR_CO2-7 MDR_CO2-8 MDR_cont-1 MDR_cont-2 MDR_cont-3 MDR_cont-4 MDR_cont-5 MDR_cont-6 MDR_cont-7 MDR_cont-8 MDR_Neg3 MDR_Neg4 MDR_mm MDR_blank MDR_blank1 MDR_blank2 AURKA_Neg1 AURKA_Neg2 AURKA_CO2-1 AURKA_CO2-2 AURKA_CO2-3 AURKA_CO2-4 AURKA_CO2-5 AURKA_CO2-6 AURKA_CO2-7 AURKA_CO2-8 AURKA_cont-1 AURKA_cont-2 AURKA_cont-3 AURKA_cont-4 AURKA_cont-5 AURKA_cont-6 AURKA_cont-7 AURKA_cont-8 AURKA_Neg3 AURKA_Neg4 AURKA_mm AURKA_blank AURKA_blank1 AURKA_blank2 AverageEfficiency_OfReplicateSamples Error! Error! 0.88189 0.768745 0.780819 0.760161 0.869277 0.787696 0.789327 0.735226 0.86715 0.839608 0.830036 0.744124 0.81771 0.737374 0.821645 0.812143 Error! 0.829438 1.10277 Error! Error! Error! Error! Error! 0.870187 0.759882 1.13753 0.687355 1.09299 0.828085 0.805254 1.09017 1.02442 0.903405 0.769091 0.856002 0.879055 0.995732 0.991301 0.897896 Error! Error! Error! Error! Error! Error! Error! Error! 1.00532 0.750214 0.978528 0.876726 1.00105 0.741823 0.965032 0.914936 1.10555 0.927624 1.09559 0.947138 1.01057 0.892875 1.07607 0.930661 Error! Error! Error! Error! Error! Error! StdErr_OfReplicateSamplesEfficiency: Error! Error! 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Error! 0 0 Error! Error! Error! Error! Error! 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Error! Error! Error! Error! Error! Error! Error! Error! 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Error! Error! Error! Error! Error! Error! CoefficientVariation(CV%)_OfReplicateSamplesEfficiencies: Error! Error! 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Error! 0 0 Error! Error! Error! Error! Error! 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Error! Error! Error! Error! Error! Error! Error! Error! 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Error! Error! Error! Error! Error! Error! AverageCT_OfReplicateSamples: 28.1822 26.5675 21.1414 20.6731 23.7523 23.4672 19.8971 21.4303 20.4591 25.156 21.64 22.694 20.6838 20.4003 20.4883 19.381 21.9148 18.8785 24.5229 41.7881 24.8992 47.3972 55.186 10.8886 30.8434 34.6921 30.7984 33.108 34.7713 33.2243 34.2359 32.3423 33.2334 34.2776 34.9403 34.8694 33.8993 34.1775 33.6256 34.5207 35.6715 35.0272 31.4514 7.43166 -42 -42 13.5138 15.0089 8.96233 -42 31.9787 32.7111 34.1622 33.1036 34.6372 33.3538 33.1013 33.1302 35.0472 34.274 33.9532 33.1617 34.1591 34.5434 34.5855 32.8466 15.0677 12.3238 14.233 14.8188 12.7089 12.7221 StdErr_OfReplicateSamplesCT: 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CV%_OfReplicateSamplesCTs: 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GeneNames SOD MDR AURKA AverageEfficiency_OfGenes: 0.820841 0.911773 0.951232 Stdev_OfGenesEfficiency: 0.0196844 0.0329149 0.0262706 MeanCV%_OfGenesEfficiencies -335.333 -503 -503 MeanCV%_OfGenesCTs 0 0 0 Some problems are found! ------Please check your data and re-run Realtime PCR Miner (Version 2.0, Author: Dr. Sheng Zhao, Email: windupzs@gmail.com). Error#1: Sample#1, Exponential phase fit failed! Error#2: Sample#2, Exponential phase fit failed! Error#3: Sample#19, Exponential phase fit failed! Error#4: Sample#22, Exponential phase fit failed! Error#5: Sample#23, Exponential phase fit failed! Error#6: Sample#24, Exponential phase fit failed! Error#7: Sample#25, Exponential phase fit failed! Error#8: Sample#26, Exponential phase fit failed! Error#9: Sample#43, Exponential phase fit failed! Error#10: Sample#44, Exponential phase fit failed! Error#11: Sample#45, Exponential phase fit failed! Error#12: Sample#46, Exponential phase fit failed! Error#13: Sample#47, Exponential phase fit failed! Error#14: Sample#48, Exponential phase fit failed! Error#15: Sample#49, Exponential phase fit failed! Error#16: Sample#50, Exponential phase fit failed! Error#17: Sample#67, Exponential phase fit failed! Error#18: Sample#68, Exponential phase fit failed! Error#19: Sample#69, Exponential phase fit failed! Error#20: Sample#70, Exponential phase fit failed! Error#21: Sample#71, Exponential phase fit failed! Error#22: Sample#72, Exponential phase fit failed!